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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931336.1_cds_XP_016478159.1_69825
CDS Infomation

[gene=LOC107799545] [db_xref=GeneID:107799545] [protein=E3 ubiquitin-protein ligase Topors-like isoform X2] [protein_id=XP_016478159.1] [location=join(114909..115225,115389..115517,115597..115654,115852..116087,117428..117455)] [gbkey=CDS]
Sequence

ATGGACTCGAGATTTAAGCGAATTGTCAATGCTGTAGTCGGGAAATCATGTCCAATATGC
CTGAGCCGGTTACACCATCGGAAAGCAGCGGTTATTATCCCATGTATGCACGCCTACTGC
ATCGACTGCATCCGCAGATGGAGCCATATGAAGCGAAAATGCCCTCTCTGCAACTCCGAC
TTTGATTCATGGTTCTCTAGAATCAGTTTCTCCTCCGGGACCTTTAAGAAAGAGAAATTA
TCAGCTCGTAACGAGACTAAGAAATTACACTTAGGGTTTGCCTCATCTAGGCCGAAAGAT
CGATTGGTGGACCAAAGGAGAAGGAGAGACGAGCTGAATGCTTTTGGCTCCAGAACGAGG
CCGTTCCCAAGGCGGCGATCCTTTGATCAGATTGGAGCTTCAAATTCAGATGATATTAAC
AGGAGAATAATTCACTGGCGTGCCAGTATATATGAAGAGAGATTGCAGGCTGTTCGGTTT
TCATCCAAATATTGTCTTGTGCAGCGCATGGATAATAGGAGTGCCAAAGAAAAGATGTTA
CAGAGAATAGAACCTTGGATAGGAAGGGAGCTGCAGGCTATACTGGGGGATCCAGATCCG
TCCATTATCGTCCATGTTGTTACCTCACTTTTTATCTCCGAAAATACACATTCAACACAA
CAGTATGCCGGAGATGATTTTCTTGCGCCGTTGCGACCCTTCTTGCATGAACATGCTGAA
ATGTTTTGGCATGAACTGAGAAAGCCCTTTGTCTATGCAAACATATGA

Peptide Sequence

PEP ID

XP_016478159.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase Topors-like isoform X2 [Nicotiana tabacum]
Sequence

MDSRFKRIVNAVVGKSCPICLSRLHHRKAAVIIPCMHAYCIDCIRRWSHMKRKCPLCNSD
FDSWFSRISFSSGTFKKEKLSARNETKKLHLGFASSRPKDRLVDQRRRRDELNAFGSRTR
PFPRRRSFDQIGASNSDDINRRIIHWRASIYEERLQAVRFSSKYCLVQRMDNRSAKEKML
QRIEPWIGRELQAILGDPDPSIIVHVVTSLFISENTHSTQQYAGDDFLAPLRPFLHEHAE
MFWHELRKPFVYANI

Transcript Sequence

Gene sequence data has not been registered.